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  1. Conformational dynamics of adenylate kinase in crystals

    21 Feb 2024 | BioXFEL Publications | Contributor(s): Junhyung Kim, Sojin Moon, Tod D. Romo, Yifei Yang, Euiyoung Bae, George Phillips

    http://dx.doi.org/10.1063/4.0000205 Adenylate kinase is a ubiquitous enzyme in living systems and undergoes dramatic conformational changes during its catalytic cycle. For these reasons, it is widely …

    https://bioxfel.org/resources/2201

  2. The Pixel Anomaly Detection Tool: a user-friendly GUI for classifying detector frames using machine-learning approaches

    12 Feb 2024 | BioXFEL Publications | Contributor(s): Gihan Kaushylal Ketawala, Caitlin M. Reiter, Petra Fromme, Sabine Botha

    http://dx.doi.org/10.1107/s1600576724000116 Data collection at X-ray free electron lasers has particular experimental challenges, such as continuous sample delivery or the use of novel ultrafast …

    https://bioxfel.org/resources/2200

  3. Sequence-dependent conformational preferences of disordered single-stranded RNA

    08 Feb 2024 | BioXFEL Publications | Contributor(s): Tong Wang, Weiwei He, Suzette A. Pabit, Serdal Kirmizialtin, Lois Pollack

    http://dx.doi.org/10.1016/j.bpj.2023.11.2762 journal-article Wang, T., He, W., Pabit, S. A., Kirmizialtin, S., & Pollack, L. (2024). Sequence-dependent conformational preferences of disordered …

    https://bioxfel.org/resources/2212

  4. Product-stabilized filamentation by human glutamine synthetase allosterically tunes activity

    08 Feb 2024 | BioXFEL Publications | Contributor(s): Eric R. Greene, Richard Muniz, Hiroki Yamamura, Samuel Hoff, Angelika Arada, Priyanka Bajaj, Daphne Chen, John D. Lee, Massimiliano Bonomi, Justin M. Kollman, James Fraser

    http://dx.doi.org/10.1016/j.bpj.2023.11.2135 journal-article Greene, E. R., Muniz, R., Yamamura, H., Hoff, S., Arada, A., Bajaj, P., Chen, D., Lee, J. D., Bonomi, M., Kollman, J. M., & Fraser, J. …

    https://bioxfel.org/resources/2215

  5. Computing a Bayesian multi-state model of a protein structure from an X-ray diffraction pattern

    08 Feb 2024 | BioXFEL Publications | Contributor(s): Matthew P. Hancock, James Fraser, Andrej Sali

    http://dx.doi.org/10.1016/j.bpj.2023.11.1276 journal-article Hancock, M. P., Fraser, J. S., & Sali, A. (2024). Computing a Bayesian multi-state model of a protein structure from an X-ray …

    https://bioxfel.org/resources/2213

  6. Extracting conformational heterogeneity from 2D and 3D cryo-EM data

    08 Feb 2024 | BioXFEL Publications | Contributor(s): Samuel Hoff, Massimiliano Bonomi, James Fraser, Eric Greene

    http://dx.doi.org/10.1016/j.bpj.2023.11.376 journal-article Hoff, S., Bonomi, M., Fraser, J., & Greene, E. (2024). Extracting conformational heterogeneity from 2D and 3D cryo-EM data. Biophysical …

    https://bioxfel.org/resources/2214

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